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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12323797_12325157_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12323797 - 12325157

Intron Length:

1361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCCA

5'SS Class:

major

3'SS Sequence:

TCCTTTACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTTTCCTTTACT

Flanking Amino Acid:

KFFQLEKLMQEQLPDLYSHF

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

59.3

41.4

Major BPS

76.3

0.65

67.3

39.3

Major PPT

77.4

0.62

0.8

70.4

Minor 5ss

24.2

-3

3.2

43.1

Minor BPS

86.3

1.23

1.4

100.6

26.7

Associated Gene:

Gene:

RABGAP1L

Ensembl Gene ID:

ENSAPLG00000005959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022441

12236744 - 12452889

216146

ENSAPLT00000006207

12246149 - 12452889

206741