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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12328868_12339363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12328868 - 12339363

Intron Length:

10496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTCA

5'SS Class:

major

3'SS Sequence:

TTATTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTGACTTTTATT

Flanking Amino Acid:

GQESLYKICKAYSVYDEDIG

Intron Amino Acid Position:

607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

62.8

38.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

87.2

0.84

0.7

81.4

36.1

Minor 5ss

35.3

-1.7

3.5

47.9

47.7

Minor BPS

59.6

0.38

1.7

76.16

40.9

Associated Gene:

Gene:

RABGAP1L

Ensembl Gene ID:

ENSAPLG00000005959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019583

12236744 - 12452856

216113

ENSAPLT00000006207

12246149 - 12452889

206741

ENSAPLT00000022441

12236744 - 12452889

216146