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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1233628_1272254_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1233628 - 1272254

Intron Length:

38627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGTCCTTTGATT

Flanking Amino Acid:

MITSFYEPRMIAAGKF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

79.9

32.8

Major BPS

0.85

0.9

39.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

36.3

-1.6

41.5

Minor BPS

70.1

0.71

1.1

81.19

34.2

Associated Gene:

Gene:

BCAR3

Ensembl Gene ID:

ENSAPLG00000003983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019439

1185705 - 1272359

86655