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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12438475_12440087_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12438475 - 12440087

Intron Length:

1613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTTAA

5'SS Class:

major

3'SS Sequence:

TTTTGTGTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTTCCTGTACG

Flanking Amino Acid:

FLVLNEETPKDKRVYMTVAV

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

34.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

82.6

0.73

0.9

81.2

36.5

Minor 5ss

38.2

-1.3

3.1

49.1

47.1

Minor BPS

66.2

0.37

1.9

76.81

40.2

Associated Gene:

Gene:

RABGAP1L

Ensembl Gene ID:

ENSAPLG00000005959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022441

12236744 - 12452889

216146

ENSAPLT00000019583

12236744 - 12452856

216113

ENSAPLT00000006207

12246149 - 12452889

206741