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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12447487_12448302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12447487 - 12448302

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TGCTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAATA

Flanking Amino Acid:

HVFSCEIKEAVSRILYSFST

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.3

0.8

80.6

31.4

Minor 5ss

38.4

-1.3

41.2

Minor BPS

67.5

0.55

1.5

79.43

30.3

Associated Gene:

Gene:

RABGAP1L

Ensembl Gene ID:

ENSAPLG00000005959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019583

12236744 - 12452856

216113

ENSAPLT00000006207

12246149 - 12452889

206741

ENSAPLT00000022441

12236744 - 12452889

216146