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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12448478_12451340_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12448478 - 12451340

Intron Length:

2863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTGATC

Flanking Amino Acid:

YVPNVPEGSVRIIDQSSNVE

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

75.8

34.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.7

0.62

0.8

73.5

Minor 5ss

41.4

-1

3.3

58.9

45.9

Minor BPS

0.55

1.4

78.24

31.1

Associated Gene:

Gene:

RABGAP1L

Ensembl Gene ID:

ENSAPLG00000005959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022441

12236744 - 12452889

216146

ENSAPLT00000019583

12236744 - 12452856

216113

ENSAPLT00000006207

12246149 - 12452889

206741