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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12481401_12483356_R

Intron Information:

Intron Rank:

136510

Intron Class:

major

Intron Phase:

Intron Coordinates:

12481401 - 12483356

Intron Length:

1956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

AAACTTTGAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

85.1

0.79

0.8

80.3

31.4

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

51.1

0.01

1.4

57.21

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042006

12481307 - 12484585

3279