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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12516779_12517685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12516779 - 12517685

Intron Length:

907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CCCTGTTTAATT

Flanking Amino Acid:

QLLYRASCFKVTKRDEDSSL

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.4

37.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

70.2

0.46

0.8

32.6

Minor 5ss

38.9

-1.2

2.8

49.3

46.5

Minor BPS

54.7

0.23

1.8

66.31

45.7

Associated Gene:

Gene:

RC3H1

Ensembl Gene ID:

ENSAPLG00000005341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034227

12506801 - 12537689

30889

ENSAPLT00000023296

12506801 - 12537689

30889

ENSAPLT00000005553

12506801 - 12537689

30889