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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12521298_12523183_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12521298 - 12523183

Intron Length:

1886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTAACCTTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GGTTTTTTAACC

Flanking Amino Acid:

HSKKGTDQQQPPQHSKYKTY

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

69.3

33.7

Major BPS

87.3

0.93

0.8

36.5

Major PPT

69.1

0.43

1.1

62.1

Minor 5ss

-2.2

3.4

42.5

44.5

Minor BPS

0.73

1.1

75.39

34.7

Associated Gene:

Gene:

RC3H1

Ensembl Gene ID:

ENSAPLG00000005341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034227

12506801 - 12537689

30889

ENSAPLT00000023296

12506801 - 12537689

30889

ENSAPLT00000005553

12506801 - 12537689

30889