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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12526849_12527172_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12526849 - 12527172

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTACGGGTC

5'SS Class:

major

3'SS Sequence:

TTCTACTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

CAGGCCTTAATG

Flanking Amino Acid:

SSSAPGSPPDLLESVPKNSI

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.2

59.3

39.5

Major BPS

0.65

1.1

77.4

37.3

Major PPT

82.8

0.74

0.7

81.2

30.4

Minor 5ss

35.3

-1.7

3.9

54.9

44.2

Minor BPS

59.6

0.16

1.6

55.89

45.9

Associated Gene:

Gene:

RC3H1

Ensembl Gene ID:

ENSAPLG00000005341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023296

12506801 - 12537689

30889

ENSAPLT00000005553

12506801 - 12537689

30889

ENSAPLT00000034227

12506801 - 12537689

30889