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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12527391_12528308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12527391 - 12528308

Intron Length:

918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TGTTGTCTAATT

Flanking Amino Acid:

PPFEPAPYQQGVYYPQTMSR

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.7

83.9

30.3

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

78.5

0.64

0.9

74.8

38.9

Minor 5ss

38.4

-1.3

2.9

48.7

47.5

Minor BPS

53.3

0.18

2.1

77.07

39.9

Associated Gene:

Gene:

RC3H1

Ensembl Gene ID:

ENSAPLG00000005341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034227

12506801 - 12537689

30889

ENSAPLT00000023296

12506801 - 12537689

30889

ENSAPLT00000005553

12506801 - 12537689

30889