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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12529214_12529812_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12529214 - 12529812

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TGTTTTTGTACA

Flanking Amino Acid:

TLPHPFHSEEYLDEDLKVAG

Intron Amino Acid Position:

781

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.8

87.1

Major BPS

61.3

0.28

52.7

34.2

Major PPT

84.1

0.77

0.9

79.9

37.7

Minor 5ss

-0.8

2.9

57.2

47.1

Minor BPS

52.4

0.07

1.8

68.24

38.3

Associated Gene:

Gene:

RC3H1

Ensembl Gene ID:

ENSAPLG00000005341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034227

12506801 - 12537689

30889

ENSAPLT00000023296

12506801 - 12537689

30889

ENSAPLT00000005553

12506801 - 12537689

30889