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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12532181_12533319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12532181 - 12533319

Intron Length:

1139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCACTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TTTCTGTTCACT

Flanking Amino Acid:

QGASTKSIISDYSPYGTHGG

Intron Amino Acid Position:

902

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

72.5

39.9

Major BPS

75.8

0.64

65.8

Major PPT

0.7

0.9

74.3

35.4

Minor 5ss

38.3

-1.3

3.4

56.2

Minor BPS

50.6

0.1

2.4

80.65

41.4

Associated Gene:

Gene:

RC3H1

Ensembl Gene ID:

ENSAPLG00000005341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005553

12506801 - 12537689

30889

ENSAPLT00000034227

12506801 - 12537689

30889

ENSAPLT00000023296

12506801 - 12537689

30889