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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12533411_12533518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12533411 - 12533518

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGATCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ATTTTTTGAATA

Flanking Amino Acid:

NIPSQGRFNDRERLSMSDVA

Intron Amino Acid Position:

932

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

60.7

0.24

1.1

59.7

35.7

Minor 5ss

32.6

-2

3.7

46.1

49.1

Minor BPS

0.5

1.3

73.92

31.4

Associated Gene:

Gene:

RC3H1

Ensembl Gene ID:

ENSAPLG00000005341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034227

12506801 - 12537689

30889

ENSAPLT00000023296

12506801 - 12537689

30889

ENSAPLT00000005553

12506801 - 12537689

30889