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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12535815_12536421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12535815 - 12536421

Intron Length:

607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

TTTTTTCTAAAG

Flanking Amino Acid:

IGKRTRELSMESQSSLDIKN

Intron Amino Acid Position:

1035

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

84.3

0.77

0.9

86.6

24.9

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

0.08

1.8

68.81

38.6

Associated Gene:

Gene:

RC3H1

Ensembl Gene ID:

ENSAPLG00000005341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023296

12506801 - 12537689

30889

ENSAPLT00000005553

12506801 - 12537689

30889