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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12536538_12537538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12536538 - 12537538

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCAGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGCAA

U12 Branch Point Sequence:

CTTTCTTTCAGC

Flanking Amino Acid:

VPAEDLALTFSDVPNGSALT

Intron Amino Acid Position:

1073

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

1.1

78.8

30.1

Major BPS

53.5

0.09

1.4

39.8

Major PPT

84.3

0.77

0.8

28.3

Minor 5ss

28.4

-2.5

2.9

32.1

42.4

Minor BPS

54.8

0.13

2.1

69.26

Associated Gene:

Gene:

RC3H1

Ensembl Gene ID:

ENSAPLG00000005341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005553

12506801 - 12537689

30889

ENSAPLT00000034227

12506801 - 12537689

30889

ENSAPLT00000023296

12506801 - 12537689

30889