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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12553526_12553902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12553526 - 12553902

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCGTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TAACCCTTGACT

Flanking Amino Acid:

GAKLWPLNFKEKPDLSRKII

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

35.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.6

0.69

0.8

77.2

31.5

Minor 5ss

32.6

-2

3.3

40.4

Minor BPS

75.2

0.88

1.2

83.04

37.4

Associated Gene:

Gene:

SERPINC1

Ensembl Gene ID:

ENSAPLG00000004930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005105

12551688 - 12555608

3921

ENSAPLT00000023213

12549027 - 12555608

6582