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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12554941_12555434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12554941 - 12555434

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTATTTTAAAC

Flanking Amino Acid:

SEAFHKAFLEVNEEGSEASA

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.9

81.8

38.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

72.3

0.5

69.5

41.6

Minor 5ss

43.8

-0.7

3.2

64.9

46.4

Minor BPS

61.8

0.35

1.4

68.78

36.2

Associated Gene:

Gene:

SERPINC1

Ensembl Gene ID:

ENSAPLG00000004930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023213

12549027 - 12555608

6582

ENSAPLT00000005105

12551688 - 12555608

3921