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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12601676_12601990_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12601676 - 12601990

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAA

U12 Branch Point Sequence:

CTTTCCCCAACA

Flanking Amino Acid:

PPTAAAEPPGSSMTPGKKLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

0.25

1.3

63.9

40.2

Major PPT

75.4

0.57

0.8

70.4

29.1

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

61.3

0.35

1.9

76.63

40.3

Associated Gene:

Gene:

NPL

Ensembl Gene ID:

ENSAPLG00000004168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028647

12601491 - 12612293

10803