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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12602060_12603399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12602060 - 12603399

Intron Length:

1340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GTTCCTTTCATT

Flanking Amino Acid:

AAAITPMTPDGQINLSVICQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.7

44.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.76

0.8

81.3

29.1

Minor 5ss

43.4

-0.7

3.2

57.4

46.8

Minor BPS

60.3

0.41

1.7

77.88

38.9

Associated Gene:

Gene:

NPL

Ensembl Gene ID:

ENSAPLG00000004168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028647

12601491 - 12612293

10803

ENSAPLT00000004292

12597022 - 12610223

13202