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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12604616_12605381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12604616 - 12605381

Intron Length:

766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

ACCTTCTGAATT

Flanking Amino Acid:

AEEWVRQGKDKLDHVIIHVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

81.1

0.7

0.9

76.8

37.3

Minor 5ss

32.3

-2

2.7

37.1

33.8

Minor BPS

60.8

0.42

1.4

70.32

41.3

Associated Gene:

Gene:

NPL

Ensembl Gene ID:

ENSAPLG00000004168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004292

12597022 - 12610223

13202

ENSAPLT00000028647

12601491 - 12612293

10803