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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12605440_12605530_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12605440 - 12605530

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGCGTATT

5'SS Class:

major

3'SS Sequence:

CTCTCTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCAGAT

U12 Branch Point Sequence:

CTCTCTTTCATA

Flanking Amino Acid:

ALSLPESQDLARHAAAIGAS

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

79.8

34.9

Major BPS

50.1

1.1

46.4

38.9

Major PPT

79.3

0.66

0.7

75.3

26.9

Minor 5ss

35.3

-1.7

3.2

47.5

43.4

Minor BPS

57.3

0.22

1.8

66.01

41.8

Associated Gene:

Gene:

NPL

Ensembl Gene ID:

ENSAPLG00000004168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028647

12601491 - 12612293

10803

ENSAPLT00000004292

12597022 - 12610223

13202