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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12607216_12607727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12607216 - 12607727

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

CTGTTGTGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTTTTTCATG

Flanking Amino Acid:

YHIPPLTGVKIRVEELLDGI

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

78.2

36.3

Major BPS

100

1.24

0.5

100

Major PPT

69.2

0.43

63.8

41.7

Minor 5ss

39.6

-1.2

2.8

49.5

40.3

Minor BPS

54.4

-0

1.8

62.87

40.1

Associated Gene:

Gene:

NPL

Ensembl Gene ID:

ENSAPLG00000004168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028647

12601491 - 12612293

10803

ENSAPLT00000004292

12597022 - 12610223

13202