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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12607877_12608033_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12607877 - 12608033

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CATGCCAAACTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TTCTCCCCACAT

Flanking Amino Acid:

QFAFLYGVDEQLLGALAVGV

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

50.4

0.01

42.2

37.1

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

45.8

-0.2

2.2

70.33

Associated Gene:

Gene:

NPL

Ensembl Gene ID:

ENSAPLG00000004168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028647

12601491 - 12612293

10803

ENSAPLT00000004292

12597022 - 12610223

13202