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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12608081_12609017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12608081 - 12609017

Intron Length:

937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

ATTTACTGATTG

Flanking Amino Acid:

LAVGVNGAVGSTYNYLGRKT

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.2

75.3

40.8

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

0.65

76.8

37.3

Minor 5ss

31.5

-2.1

2.4

35.1

40.7

Minor BPS

48.5

-0.2

1.9

59.92

41.8

Associated Gene:

Gene:

NPL

Ensembl Gene ID:

ENSAPLG00000004168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028647

12601491 - 12612293

10803

ENSAPLT00000004292

12597022 - 12610223

13202