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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12609970_12611141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12609970 - 12611141

Intron Length:

1172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTCATCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TGATCTGTAAGT

Flanking Amino Acid:

GEFLNFVIKLGFGVAQTKAV

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

72.3

0.5

41.1

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

49.9

0.07

2.3

73.14

43.8

Associated Gene:

Gene:

NPL

Ensembl Gene ID:

ENSAPLG00000004168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028647

12601491 - 12612293

10803