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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12692095_12692890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12692095 - 12692890

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAAATTG

5'SS Class:

major

3'SS Sequence:

ATTTGGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GATCCTTGTACA

Flanking Amino Acid:

IYSITSSFQFGEDEWRAEQR

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

66.2

40.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

81.2

0.7

0.9

77.4

41.2

Minor 5ss

41.4

-1

3.2

56.7

47.5

Minor BPS

48.3

-0.1

1.8

59.94

39.4

Associated Gene:

Gene:

LAMC1

Ensembl Gene ID:

ENSAPLG00000003279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003443

12646723 - 12707302

60580