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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12695183_12695273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12695183 - 12695273

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

TGAAGAATAAAA

Flanking Amino Acid:

GHSETCDPETGVCNCRDNTA

Intron Amino Acid Position:

703

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

84.1

0.77

0.8

76.4

37.7

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

39.1

-0.8

2.1

49.99

39.7

Associated Gene:

Gene:

LAMC1

Ensembl Gene ID:

ENSAPLG00000003279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003443

12646723 - 12707302

60580