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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12701627_12702193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12701627 - 12702193

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACATGAA

5'SS Class:

major

3'SS Sequence:

TTTCTGCACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGTTTCTGATTT

Flanking Amino Acid:

LPTVDSTGLENEANKIKKEA

Intron Amino Acid Position:

1249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.1

34.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

74.8

0.56

0.9

69.9

35.6

Minor 5ss

30.3

-2.3

3.4

46.1

Minor BPS

58.1

0.33

1.7

77.22

39.5

Associated Gene:

Gene:

LAMC1

Ensembl Gene ID:

ENSAPLG00000003279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003443

12646723 - 12707302

60580