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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12703446_12703569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12703446 - 12703569

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTGGCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTGTTTCCATCC

Flanking Amino Acid:

AEKIASSVQKSAAATRAEAD

Intron Amino Acid Position:

1404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

65.6

0.35

42.4

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

41.1

-0.6

1.9

50.13

Associated Gene:

Gene:

LAMC1

Ensembl Gene ID:

ENSAPLG00000003279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003443

12646723 - 12707302

60580