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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12704309_12704734_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12704309 - 12704734

Intron Length:

426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGGCTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACCTTTTTAATG

Flanking Amino Acid:

TVINDLLDQLGQLETVDLNK

Intron Amino Acid Position:

1490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.58

0.9

72.6

37.5

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

60.4

0.19

1.3

56.14

40.6

Associated Gene:

Gene:

LAMC1

Ensembl Gene ID:

ENSAPLG00000003279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003443

12646723 - 12707302

60580