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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12722138_12722428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12722138 - 12722428

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGATCAC

U12 Branch Point Sequence:

AGAGCGATCACG

Flanking Amino Acid:

DRSGATLGRVTIPVSHFPGG

Intron Amino Acid Position:

729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

50.8

0.02

1.2

55.1

40.4

Major PPT

78.6

0.64

0.7

76.4

25.7

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

-1.2

2.5

40.18

43.3

Associated Gene:

Gene:

LAMC2

Ensembl Gene ID:

ENSAPLG00000002568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002593

12712066 - 12728229

16164