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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12725057_12725656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12725057 - 12725656

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGCCAT

U12 Branch Point Sequence:

TGCCCCTGAGCA

Flanking Amino Acid:

AKEITTGIQQELTRLKLEAN

Intron Amino Acid Position:

1005

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

54.4

0.11

1.4

64.4

42.8

Major PPT

0.7

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

51.3

0.04

1.7

63.02

42.6

Associated Gene:

Gene:

LAMC2

Ensembl Gene ID:

ENSAPLG00000002568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002593

12712066 - 12728229

16164