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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12734794_12735431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12734794 - 12735431

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAC

U12 Branch Point Sequence:

TCCATCTTACCT

Flanking Amino Acid:

NNNVSNKPTAAKILGKVGES

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

72.7

0.56

0.9

63.4

35.2

Major PPT

76.4

0.59

0.8

73.9

31.3

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

57.6

0.32

1.7

71.55

45.6

Associated Gene:

Gene:

NMNAT2

Ensembl Gene ID:

ENSAPLG00000001034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001122

12731296 - 12749893

18598