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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12771855_12772706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12771855 - 12772706

Intron Length:

852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTGGTCTCAATT

Flanking Amino Acid:

QHCLVHLGDIARYRNQTSQA

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

78.9

0.65

0.9

77.1

37.1

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

59.4

0.37

1.7

75.27

42.3

Associated Gene:

Gene:

SMG7

Ensembl Gene ID:

ENSAPLG00000015811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038380

12753158 - 12799314

46157

ENSAPLT00000037797

12753158 - 12799314

46157

ENSAPLT00000027973

12753158 - 12801493

48336

ENSAPLT00000016529

12753158 - 12799314

46157