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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12772779_12773763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12772779 - 12773763

Intron Length:

985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

TGTTGGAGGACA

Flanking Amino Acid:

RHAAQLVPSNGQPYNQLAIL

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

82.9

0.74

0.6

81.7

23.2

Minor 5ss

-1.4

47.2

42.5

Minor BPS

38.5

-0.9

2.6

56.97

42.1

Associated Gene:

Gene:

SMG7

Ensembl Gene ID:

ENSAPLG00000015811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016529

12753158 - 12799314

46157

ENSAPLT00000038380

12753158 - 12799314

46157

ENSAPLT00000037797

12753158 - 12799314

46157

ENSAPLT00000027973

12753158 - 12801493

48336