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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12780891_12784181_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12780891 - 12784181

Intron Length:

3291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GTCTATTCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTGTTTTTATTT

Flanking Amino Acid:

PHEEDLSNNNATPLPEEFEL

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

75.2

40.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.4

0.46

62.9

42.8

Minor 5ss

-1.6

3.3

45.6

43.8

Minor BPS

56.7

0.29

1.6

70.24

42.1

Associated Gene:

Gene:

SMG7

Ensembl Gene ID:

ENSAPLG00000015811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037797

12753158 - 12799314

46157

ENSAPLT00000027973

12753158 - 12801493

48336

ENSAPLT00000016529

12753158 - 12799314

46157

ENSAPLT00000038380

12753158 - 12799314

46157