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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12784243_12784828_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12784243 - 12784828

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCAATGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

CTGTAATTAATA

Flanking Amino Acid:

QGFLALRPSFRNLDFSKGHQ

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

0.82

0.8

24.9

Major PPT

65.5

0.35

64.5

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

54.4

0.13

1.8

65.31

41.3

Associated Gene:

Gene:

SMG7

Ensembl Gene ID:

ENSAPLG00000015811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037797

12753158 - 12799314

46157

ENSAPLT00000027973

12753158 - 12801493

48336

ENSAPLT00000016529

12753158 - 12799314

46157

ENSAPLT00000038380

12753158 - 12799314

46157