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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12785333_12785416_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12785333 - 12785416

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCACCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

AGAGTCTCACCT

Flanking Amino Acid:

QPRLIQCENEETSIAEPLST

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

0.68

0.8

73.3

31.2

Minor 5ss

31.4

-2.1

3.1

46.4

Minor BPS

45.5

-0.2

1.9

59.82

43.4

Associated Gene:

Gene:

SMG7

Ensembl Gene ID:

ENSAPLG00000015811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037797

12753158 - 12799314

46157