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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12796241_12796815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12796241 - 12796815

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTATTTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTCAAATAAAT

Flanking Amino Acid:

LSLSGFSLNQERYPNNSMFN

Intron Amino Acid Position:

995

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

88.7

0.96

0.8

36.5

Major PPT

81.9

0.72

0.9

73.9

40.2

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

47.1

-0.1

2.1

74.92

40.4

Associated Gene:

Gene:

SMG7

Ensembl Gene ID:

ENSAPLG00000015811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038380

12753158 - 12799314

46157

ENSAPLT00000037797

12753158 - 12799314

46157

ENSAPLT00000027973

12753158 - 12801493

48336

ENSAPLT00000016529

12753158 - 12799314

46157