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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12798438_12798539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12798438 - 12798539

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TTCCTCTGAATT

Flanking Amino Acid:

IADRWKTDKPAMGGFGLDYL

Intron Amino Acid Position:

1105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.4

1.17

0.7

94.5

Major BPS

69.8

0.49

37.5

Major PPT

76.5

0.6

0.8

74.2

29.2

Minor 5ss

-2.9

41.3

45.2

Minor BPS

63.9

0.52

1.4

77.82

38.8

Associated Gene:

Gene:

SMG7

Ensembl Gene ID:

ENSAPLG00000015811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037797

12753158 - 12799314

46157

ENSAPLT00000027973

12753158 - 12801493

48336

ENSAPLT00000016529

12753158 - 12799314

46157

ENSAPLT00000038380

12753158 - 12799314

46157