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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12805350_12805925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12805350 - 12805925

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCACTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

AAGCCTCTGACA

Flanking Amino Acid:

ATTQPREAAAETKTAPCILK

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.8

39.3

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

0.76

0.8

77.9

29.6

Minor 5ss

40.1

-1.1

3.2

57.3

46.8

Minor BPS

48.1

-0.1

1.6

55.74

36.7

Associated Gene:

Gene:

NCF2

Ensembl Gene ID:

ENSAPLG00000015000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015685

12802765 - 12812210

9446