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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12807275_12807605_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12807275 - 12807605

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CCACCTGGCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

CTCTTCCCACCT

Flanking Amino Acid:

VELQNKLHSQDEIPPEPEIP

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

58.3

0.19

51.7

36.6

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

44.4

-0.3

2.1

63.92

46.5

Associated Gene:

Gene:

NCF2

Ensembl Gene ID:

ENSAPLG00000015000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015685

12802765 - 12812210

9446