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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12807979_12808197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12807979 - 12808197

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCAAACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

GCTTCCAAACCT

Flanking Amino Acid:

PPRPKTPEILKALEGQPHRV

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

62.7

0.32

1.2

33.2

Major PPT

60.6

0.24

0.9

52.4

35.9

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

47.1

-0.1

2.2

69.34

47.1

Associated Gene:

Gene:

NCF2

Ensembl Gene ID:

ENSAPLG00000015000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015685

12802765 - 12812210

9446