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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12811008_12811223_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12811008 - 12811223

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

ATCCCTGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAG

U12 Branch Point Sequence:

TTGCTCCCATCC

Flanking Amino Acid:

GLRYRLFACEILYNIALVYA

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.8

76.8

33.7

Major BPS

58.2

0.2

1.5

67.3

37.8

Major PPT

65.5

0.35

1.1

61.1

39.5

Minor 5ss

27.4

-2.6

2.7

30.4

Minor BPS

43.1

-0.5

56.56

41.7

Associated Gene:

Gene:

NCF2

Ensembl Gene ID:

ENSAPLG00000015000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015685

12802765 - 12812210

9446