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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12827329_12828514_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12827329 - 12828514

Intron Length:

1186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGACACCG

5'SS Class:

major

3'SS Sequence:

GGGTCTCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

CCTTGCTGACTC

Flanking Amino Acid:

PGGTWRGETVGSFTVRLLQI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.25

1.2

46.9

43.4

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

61.3

0.26

0.9

54.3

36.7

Minor 5ss

31.9

-2.1

32.1

41.9

Minor BPS

44.7

-0.4

2.1

54.19

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045073

12827274 - 12829864

2591