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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12828680_12828851_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12828680 - 12828851

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGACTGGG

5'SS Class:

weak_major

3'SS Sequence:

TGCTGTGCGTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAAGAC

U12 Branch Point Sequence:

GAGTCCAGGAGG

Flanking Amino Acid:

QPWVRPALPRNTVHTPIPSH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.9

0.14

1.2

48.1

42.7

Major BPS

46.4

-0.2

0.9

38.8

Major PPT

46.5

-0.2

1.8

53.8

45.9

Minor 5ss

34.4

-1.8

3.2

45.2

Minor BPS

40.9

-0.8

42.03

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045073

12827274 - 12829864

2591