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Intron Name: Anas_platyrhynchos_platyrhynchos_8_13000976_13002287_R

Intron Information:

Intron Rank:

136351

Intron Class:

major

Intron Phase:

Intron Coordinates:

13000976 - 13002287

Intron Length:

1312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTTTCTGCTATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

84.5

0.78

0.6

84.6

23.2

Minor 5ss

36.9

-1.5

3.2

48.2

47.9

Minor BPS

43.6

-0.6

2.4

58.99

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030680

13000947 - 13003921

2975

ENSAPLT00000025203

13000947 - 13004229

3283