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Intron Name: Anas_platyrhynchos_platyrhynchos_8_13002672_13002805_R

Intron Information:

Intron Rank:

136352

Intron Class:

major

Intron Phase:

Intron Coordinates:

13002672 - 13002805

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTGCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

TTTTTTTCTCCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.1

40.1

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

75.1

0.56

0.9

71.4

32.9

Minor 5ss

29.4

-2.4

3.3

Minor BPS

39.9

-0.7

3.6

75.28

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030680

13000947 - 13003921

2975

ENSAPLT00000025203

13000947 - 13004229

3283