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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1300468_1301038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1300468 - 1301038

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTATTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTCTGTTTATT

Flanking Amino Acid:

SSSVRDAVDMACSALGVAQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

82.4

0.73

0.9

35.7

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

2.3

76.71

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039296

1296960 - 1304535

7576